Salvage of #35508 (@dchenk), rebased onto current main. Resolved the tests/tools/test_stage2_hook_puid_pgid.py conflict (kept both the envdir-creation regression test on main and the new config-migration tests). Docker image upgrades replace code under $INSTALL_DIR but preserve $HERMES_HOME on the mounted volume, so the persisted config.yaml never received the schema migrations that non-Docker `hermes update` runs (#35406). This adds scripts/docker_config_migrate.py, invoked from stage2-hook after first-boot seeding and before gateway services start: it backs up config.yaml + .env, runs migrate_config(interactive=False), and honors HERMES_SKIP_CONFIG_MIGRATION=1 for manual control. Also fixes a latent bug in check_config_version(): it called load_config() which deep-merges DEFAULT_CONFIG, so a legacy config with no raw _config_version falsely reported as already-current. It now reads the raw on-disk file so legacy configs are correctly detected for migration. Differs from #35508 as submitted (Option B cleanup): dropped the `_config_version` line added to cli-config.yaml.example and removed the accompanying test_cli_config_example_declares_latest_version change-detector test. The example is a copy-template and has no business asserting a schema version; check_config_version() reads the user's real config.yaml, not the example. This removes a second sync point that drifts on every version bump. Closes #35508. Fixes #35406. Co-authored-by: Dmitriy Cherchenko <17372886+dchenk@users.noreply.github.com>
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